Unit 8: Evolution AP BIO

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Phylogenetic Tree

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62 Terms

1

Phylogenetic Tree

Diagram that shows the classification of a species into more and more specific group

  • New branches have some significant differences

  • same as Cladograms

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Clade

group of organisms that includes an ancestor and all descendants of that ancestor on the phylogenetic tree (also known as monophyletic)

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Derived trait

characteristics that are different from the ancestor

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Ancestral Trait

characteristics or features inherited from ancestors

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Types of Trees

Morphological

  • Structure

Molecular

  • Look at mitochondrial or nuclear DNA

  • more accurate than morphological

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Monophyletic

  • common ancestor and all the descendents

    • clade

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Paraphyletic

organisms but not all descendents

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Polyphyletic

do not include common ancestor and may be product of convergent evolution

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Outgroup

distant relative to all other organisms being compared

  • purpose

    • helps determine what traits are ancestral and which are derived

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Ingroup

all other organisms being compared

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Convergent Evolution

  • evolving independently after facing similar pressures

    • homoplasies

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Evolutionary Reversal

evolve back to an ancestral state from a derive state after facing similar pressures

  • homoplasies

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Homoplasies

similarities in traits or characteristics between different organisms that are not due to shared ancestry but rather to convergent evolution, evolutionary reversals, or other factors

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Parsimony Principle

simplest explanation with the fewest assumptions

  • using the fewest evolutionary changes to construct a phylogenetic tree

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Species

groups of individuals who can actually, or potentially, interbreed and produce fertile offspring

  • genetic mixing is possible

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Speciation

Forming a new distinct species from a preexisting one

  • how?

    • isolated by different environments

    • favorable adaptations accumulate

    • become so different that they don’t interbreed anymore

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Anagenesis

Parent species changes and transforms into one new species

  • type of speciation

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Cladogenesis

single ancestral species splits into two or more distinct lineages

  • type of speciation

  • promotes biological diversity

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Gradualism

Evolution happens through many small changes

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Punctuated Equilibrium

Evolution happens through short bursts of change

  • supported by fossil record because its hard to find transitional fossils

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Allopatric Speciation

geographical division

  • the population is divided by a physical barrier

  • each separated population accumulates variation due to

    • natural selection

    • mutations

    • genetic drift

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Sympatric Speciation

New species without geographical division

  • Change in ecological requirements

  • Polyploidy

    • can only mate with other polyploidy

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Polyploidy

having multiple sets of chromosomes due to errors from meiosis (nondisjunction)

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Autopolyploidy

Chromosome number is accidently not reduced in gametes of parent (2N stays 2N)

  • two times the amount of chromosomes so (4N)

    • usually happens in plants

  • can only mate with other 4N

    • new species

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Allopolyploidy

mating between two different species

  • interspecific hybrids are usually sterile

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Population Evolution

Individuals do NOT evolve; populations do

  • Genetic makeup/allele frequency changes over time

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Population

a group of interbreeding organisms in a geographic area

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Allele Frequency

How much(percent) of the gene pool is a specific allele

  • from 0.0 to 1.0

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Mutations

Random changes in the DNA of an organism that could be neutral, harmful or beneficial depending on the environment

  • increase variation

  • affect phenotype because the DNA 🡪 genotype 🡪 phenotype

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Genetic Drift

Random changes in the allele frequencies of a small population

  • decrease variation

  • Gene pool will remain the same when there is a large population size, when you decrease the size, genetic drift will occur

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Bottleneck

decrease in size caused by natural catastrophe- floods, volcanic eruptions, ice age; predation, disease

  • decrease variation

  • population undergoes dramatic decrease in size

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Founder Effect

migration and isolation of a small subset of the population

  • forms a new population

  • reproduce with each other

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Gene Flow

movement of individuals and alleles between populations

  • not significant source of evolution in large populations, but substantial in small pops

  • introduce alleles

  • remove alleles

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Natural Selection

chooses for or against based on current abiotic(living) and biotic(nonliving) factors at a moment in time

  • choosing against phenotype

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Hardy Weinberg Equilibrium

null hypothesis to evolution

  • calculates if there are significant changes in the gene pool/ number of alleles present

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Hardy Weinberg Equilibrium conditions

  1. Random mating

    1. no choosing mates based on certain phenotypes

  2. No mutation

  3. No events

    1. no genetic drift/ migration

  4. Large population size

    1. In small populations, allele frequency is more likely to change due to genetic drift

  5. No natural selection

    1. Specific phenotypes/ alleles will not be favored

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Charles Darwin Theory of Evolution

  • Species reproduce

  • If growth rate was unchecked,
    overpopulation would occur

  • Resources become scarce

  • Competition among and
    between species

  • Individuals are different= VARIATION

  • Only best suited to environment will survive to reproduce

  • Those who reproduce/choose to reproduce pass on their genes

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What determines if an individual will survive to affect the gene pool?

  • Competition

  • Natural Selection

    • Phenotypic Selection

    • Right Place, Right Time

    • Variation (is it beneficial to the gene pool)

  • Reproduction/ Fitness

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Intraspecific Competition

Competition within one species

  • lose-lose situation

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Interspecific Competition

Competition between different species

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Fitness

measured by the ability to pass its genetics onto the next generation, compared to other organisms in the population

  • how many children you have that survive to adulthood

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Artificial Selection

Human driven selection

  1. Humans can select traits to co-breed

    1. Many genes cross

    2. Not selective to just one trait- intended AND unintended traits cross

  2. Humans can select specific genes for

    manipulation

    1. One gene to manipulate → GMOs

    2. Gene switches are not fully

      understood

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Why is variation good?

Species with little genetic diversity (little variation) are at risk of extinction

  • allows each individual in the population to respond differently to the same environmental change

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Sexual Reproduction

Creates new combination of alleles

  • Crossing Over

  • Independent Assortment

    • random combinations of maternal and paternal chromosomes

  • Random Fertilization

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Stabilizing Selection

Eliminates individuals that have extreme or unusual traits

  • Reduces variation in a population

  • Most common type of natural selection

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Directional Selection

Individuals with an extreme phenotype contribute more offspring to the next generation

  • Traits at opposite extreme are selected against

  • Could lead to speciation

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Disruptive Selection

Both extreme phenotypes are favored over the intermediate phenotype

  • divergent evolution

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Sexual Selection

Acts on the characteristics that determine reproductive success, not survival

  • females choose superior males based upon certain characteristics

  • Females makes a greater energy investment in producing offspring than males, they can increase their fitness by increasing the quality of their offspring by choosing superior males

  • Males contribute little energy to the production of offspring and therefore increase their fitness by maximizing quantity of offspring produced

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Sexual Selection leads to…

Sexual Dimorphism

  • female and male appearance is different

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Evidence for Evolution

  • Fossil record

  • Anatomical similarities

  • Embryological similarities

  • Biochemical similarities

  • Conserved core processes

  • Homeostatic controls

  • Biogeography

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Fossil Record

provide record of transitional forms

  • Law of Superposition

  • evidence of evolution

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Law of Superposition

in an undisturbed sequence of rock layers

  • youngest are at the top

  • the oldest rocks are at the bottom

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Homologous structures

Similar structure but possibly different function 

  • Evidence of common ancestry (divergent evolution)

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Divergent Evolution

One group develops into a new, distinct species

  • two populations adapting to separate environmental needs

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Adaptive Radiation

Extreme form of divergent evolution

  • Ancestral species diverges into a wide variety of new species

    • ex

      • Galapagos finches

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Analogous structures

Similar function but different structure

  • resemble each other due to similar selective pressures and not recent common ancestry

  • evidence of convergent evolution

  • ex.

    • wings

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Vestigial Structures

Remains of structures that are no longer needed

  • evidence of evolution

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Embryological similarities

Embryos of related species show similar patterns of development in early stages

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Biochemical similarities

All species use the same molecular building blocks

  • Use the same genetic code and share amino acids

  • Compare amino acid sequences between species

    • Similar the code the closer related

  • product of convergent evolution

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Conserved core processes

The things that cells do that are shared between all cells

  • Transcription

  • Translation

  • organelles

  • Central Dogma of Biology

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Homeostatic Controls

control systems support common ancestry

  • Ex. (excretory system)

    • Utilizing membranes in kidney to clean out keep concentration of particular things

    • Worms kinda have the same thing

    • Both uses membranes to maintain homeostasis

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Biogeography

Geographic distribution of species

  • Islands have many animal and plant species that are endemic (related to species from the nearest mainland)

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