Phylogenetic Tree
Diagram that shows the classification of a species into more and more specific group
New branches have some significant differences
same as Cladograms
Clade
group of organisms that includes an ancestor and all descendants of that ancestor on the phylogenetic tree (also known as monophyletic)
Derived trait
characteristics that are different from the ancestor
Ancestral Trait
characteristics or features inherited from ancestors
Types of Trees
Morphological
Structure
Molecular
Look at mitochondrial or nuclear DNA
more accurate than morphological
Monophyletic
common ancestor and all the descendents
clade
Paraphyletic
organisms but not all descendents
Polyphyletic
do not include common ancestor and may be product of convergent evolution
Outgroup
distant relative to all other organisms being compared
purpose
helps determine what traits are ancestral and which are derived
Ingroup
all other organisms being compared
Convergent Evolution
evolving independently after facing similar pressures
homoplasies
Evolutionary Reversal
evolve back to an ancestral state from a derive state after facing similar pressures
homoplasies
Homoplasies
similarities in traits or characteristics between different organisms that are not due to shared ancestry but rather to convergent evolution, evolutionary reversals, or other factors
Parsimony Principle
simplest explanation with the fewest assumptions
using the fewest evolutionary changes to construct a phylogenetic tree
Species
groups of individuals who can actually, or potentially, interbreed and produce fertile offspring
genetic mixing is possible
Speciation
Forming a new distinct species from a preexisting one
how?
isolated by different environments
favorable adaptations accumulate
become so different that they don’t interbreed anymore
Anagenesis
Parent species changes and transforms into one new species
type of speciation
Cladogenesis
single ancestral species splits into two or more distinct lineages
type of speciation
promotes biological diversity
Gradualism
Evolution happens through many small changes
Punctuated Equilibrium
Evolution happens through short bursts of change
supported by fossil record because its hard to find transitional fossils
Allopatric Speciation
geographical division
the population is divided by a physical barrier
each separated population accumulates variation due to
natural selection
mutations
genetic drift
Sympatric Speciation
New species without geographical division
Change in ecological requirements
Polyploidy
can only mate with other polyploidy
Polyploidy
having multiple sets of chromosomes due to errors from meiosis (nondisjunction)
Autopolyploidy
Chromosome number is accidently not reduced in gametes of parent (2N stays 2N)
two times the amount of chromosomes so (4N)
usually happens in plants
can only mate with other 4N
new species
Allopolyploidy
mating between two different species
interspecific hybrids are usually sterile
Population Evolution
Individuals do NOT evolve; populations do
Genetic makeup/allele frequency changes over time
Population
a group of interbreeding organisms in a geographic area
Allele Frequency
How much(percent) of the gene pool is a specific allele
from 0.0 to 1.0
Mutations
Random changes in the DNA of an organism that could be neutral, harmful or beneficial depending on the environment
increase variation
affect phenotype because the DNA 🡪 genotype 🡪 phenotype
Genetic Drift
Random changes in the allele frequencies of a small population
decrease variation
Gene pool will remain the same when there is a large population size, when you decrease the size, genetic drift will occur
Bottleneck
decrease in size caused by natural catastrophe- floods, volcanic eruptions, ice age; predation, disease
decrease variation
population undergoes dramatic decrease in size
Founder Effect
migration and isolation of a small subset of the population
forms a new population
reproduce with each other
Gene Flow
movement of individuals and alleles between populations
not significant source of evolution in large populations, but substantial in small pops
introduce alleles
remove alleles
Natural Selection
chooses for or against based on current abiotic(living) and biotic(nonliving) factors at a moment in time
choosing against phenotype
Hardy Weinberg Equilibrium
null hypothesis to evolution
calculates if there are significant changes in the gene pool/ number of alleles present
Hardy Weinberg Equilibrium conditions
Random mating
no choosing mates based on certain phenotypes
No mutation
No events
no genetic drift/ migration
Large population size
In small populations, allele frequency is more likely to change due to genetic drift
No natural selection
Specific phenotypes/ alleles will not be favored
Charles Darwin Theory of Evolution
Species reproduce
If growth rate was unchecked,
overpopulation would occur
Resources become scarce
Competition among and
between species
Individuals are different= VARIATION
Only best suited to environment will survive to reproduce
Those who reproduce/choose to reproduce pass on their genes
What determines if an individual will survive to affect the gene pool?
Competition
Natural Selection
Phenotypic Selection
Right Place, Right Time
Variation (is it beneficial to the gene pool)
Reproduction/ Fitness
Intraspecific Competition
Competition within one species
lose-lose situation
Interspecific Competition
Competition between different species
Fitness
measured by the ability to pass its genetics onto the next generation, compared to other organisms in the population
how many children you have that survive to adulthood
Artificial Selection
Human driven selection
Humans can select traits to co-breed
Many genes cross
Not selective to just one trait- intended AND unintended traits cross
Humans can select specific genes for
manipulation
One gene to manipulate → GMOs
Gene switches are not fully
understood
Why is variation good?
Species with little genetic diversity (little variation) are at risk of extinction
allows each individual in the population to respond differently to the same environmental change
Sexual Reproduction
Creates new combination of alleles
Crossing Over
Independent Assortment
random combinations of maternal and paternal chromosomes
Random Fertilization
Stabilizing Selection
Eliminates individuals that have extreme or unusual traits
Reduces variation in a population
Most common type of natural selection
Directional Selection
Individuals with an extreme phenotype contribute more offspring to the next generation
Traits at opposite extreme are selected against
Could lead to speciation
Disruptive Selection
Both extreme phenotypes are favored over the intermediate phenotype
divergent evolution
Sexual Selection
Acts on the characteristics that determine reproductive success, not survival
females choose superior males based upon certain characteristics
Females makes a greater energy investment in producing offspring than males, they can increase their fitness by increasing the quality of their offspring by choosing superior males
Males contribute little energy to the production of offspring and therefore increase their fitness by maximizing quantity of offspring produced
Sexual Selection leads to…
Sexual Dimorphism
female and male appearance is different
Evidence for Evolution
Fossil record
Anatomical similarities
Embryological similarities
Biochemical similarities
Conserved core processes
Homeostatic controls
Biogeography
Fossil Record
provide record of transitional forms
Law of Superposition
evidence of evolution
Law of Superposition
in an undisturbed sequence of rock layers
youngest are at the top
the oldest rocks are at the bottom
Homologous structures
Similar structure but possibly different function
Evidence of common ancestry (divergent evolution)
Divergent Evolution
One group develops into a new, distinct species
two populations adapting to separate environmental needs
Adaptive Radiation
Extreme form of divergent evolution
Ancestral species diverges into a wide variety of new species
ex
Galapagos finches
Analogous structures
Similar function but different structure
resemble each other due to similar selective pressures and not recent common ancestry
evidence of convergent evolution
ex.
wings
Vestigial Structures
Remains of structures that are no longer needed
evidence of evolution
Embryological similarities
Embryos of related species show similar patterns of development in early stages
Biochemical similarities
All species use the same molecular building blocks
Use the same genetic code and share amino acids
Compare amino acid sequences between species
Similar the code the closer related
product of convergent evolution
Conserved core processes
The things that cells do that are shared between all cells
Transcription
Translation
organelles
Central Dogma of Biology
Homeostatic Controls
control systems support common ancestry
Ex. (excretory system)
Utilizing membranes in kidney to clean out keep concentration of particular things
Worms kinda have the same thing
Both uses membranes to maintain homeostasis
Biogeography
Geographic distribution of species
Islands have many animal and plant species that are endemic (related to species from the nearest mainland)