Biology vocab chapter 20

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To work directly with specific genes, scientists prepare well-defined DNA segments in multiple identical copies by a process called

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32 Terms

1

To work directly with specific genes, scientists prepare well-defined DNA segments in multiple identical copies by a process called

DNA cloning

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2

are small, circular DNA molecules that replicate separately from the bacterial chromosome

plasmids

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3

Researchers can insert DNA into a plasmid to produce a ______________ ________ _which contains DNA from two different sources

recombinant DNA molecule,

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4

production of multiple copies of a single gene is a type of DNA cloning called

  • useful for amplifying genes to produce a protein product for research, medical, or other purposes

gene cloning

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5

A plasmid used to clone a foreign gene is called a

cloning vector

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cuts DNA molecules at a specific DNA sequence

Restriction enzyme

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7

The site at which restriction enzymes cut

restriction sites

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8

a restriction enzyme usually makes many cuts in a long DNA molecule yielding…

restriction fragments

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9
  • The most useful restriction enzymes cut DNA in a staggered way, producing fragments with at least one single-stranded end 

  • bond with complementary of these in other fragements and use DNA ligase to seal the bond

sticky ends

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10

What is often used as a cloning vector and why?

  • Bacterial plasmids

    • readily obtained

    • easily manipulated

    • easily introduced into bacterial cells

    • rapidly multiplied once in the bacteria 

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  • a decives used to separate and visualize the restriction fragments produced

  • This technique uses a gel made of a polymer that has microscopic holes of different sizes, through which shorter fragments can travel faster

gel electrophoresis

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  • can produce many copies of a specific target segment of DNA,

  • uses a three step process: heating (denaturing), cooling (annealing), and extension

  • The process uses primers, short single-stranded DNA molecules complementary to sequences to either side of the target sequence

Polymerase chain reaction PCR

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  • a cloning vector that contains a highly active bacterial promoter

    • used to overcome difference in promoters

expression vector

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  • applying a brief electrical pulse to create temporary holes in plasma membranes

    • method of introducing recombinat DNA into eukaryotic cells

electroporation

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complementary molecules of DNA or RNA that can detect mRNA

nucleic acid probes

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  • uses fluorescent dyes attached to probes to identify the location of specific mRNAs in place in the intact organism

in situ hybridication

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  • useful for comparing amounts of specific mRNAs in several samples at the same time

  • is used to synthesize a complementary DNA (cDNA) copy of each mRNA in the sample and uses PCR to amplify DNA segaments of interest from the cDNA

Reverse transcriptase-polymerase chain reaction (RT-PCR)

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  • sequence cDNA samples from different tissues or embryonic stages to determine the gene expression differences between them

    • RNAs are isolated, cut into short, similar-sized fragments, converted into cDNAs, and sequenced

    • powerful because:

      • It does not depend on knowing genomic sequences

      • It can measure levels of expression over a wide range

      • Careful analysis provides a wealth of information about expression of a particular gene

RNA sequencing/ RNA-seq

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  • compare patterns of gene expression in different tissues at different times or under different conditions

DNA microarray assay

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  • specific mutations are introduced into a cloned gene, altering or destroying its function

    • When the mutated gene is returned to the cell, the normal gene’s function might be determined by examining the mutant’s phenotype

in vitro mutagenesis

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  • engineer the new allele so that it is favored for inheritance over the wild type allele

gene drive

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can silence gene expression

  • Synthetic double-stranded RNA molecules matching the sequence of a particular gene are used to break down or block the gene’s mRNA

RNAi

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  • single nucleotide variants, are among the most useful genetic markers

  • SNPs (single nucleotide polymorphisms)

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  • is a relatively unspecialized cell that can reproduce itself indefinitely, or under certain conditions can differentiate into one or more types of specialized cells

stem cell

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a cell that can generate a complete new organism

totipotent

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embroyonic stem cells that are capable of differentiating into many different cell types

pluripotent

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27
  • the manipulation of organisms or their components to make useful products

biotechnology

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  • the introduction of genes into an afflicted individual for therapeutic purposes 

gene therapy

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29
  • is a gene that is transferred from one organism into another

transgene

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animals that can express a transgene

transgenic

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31

an individuals uinique set of genetic markers, can be obtained by analysis of tissue or body fluids

genetic profile

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32
  • Genetic profiles are currently analyzed using genetic markers

    • are variations in the number of repeats of specific DNA sequences; they are analyzed by PCR and gel electrophoresis

  • called short tandem repeats (STRs) (repetive units of DNA)

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