AP Bio DNA and RNA unit

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Nucleotide

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61 Terms

1

Nucleotide

one nitrogenous base, one deoxyribose sugar, and one phosphate group

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2

Nitrogenous bases have 2 categories

pyrimidines and purines

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3

pyrimidines

cytosine, thymine, and uracil

single 6-membered ring structure

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4

purines

adenine and guanine

double ring structure (one 5-membered ring and one 6-membered ring)

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5

Cytosine always pairs with

guanine

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6

Adenine always pairs with

Thymine (DNA)

Uracil (RNA)

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7

Deoxyribose

5 carbon sugar

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8

1’ is attached to the

nitrogenous base

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9

5’ is attached to the

phosphate

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10

phosphate

attached between the 5’ carbon of one nucleotide and the 3’ carbon of the next

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11

base pairs are held together by

hydrogen bonds

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12

hydrogen bonding is important because

weak bonds are easily able to separate for copying

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13

the backbone of each strand are the

sugar and phosphate

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14

the two strands are

antiparallel

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15

antiparallel

the 3’ end of one strand faces the 5’ end of the other strand

don’t go in the same direction

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16

two strands of DNA are twisted together to form the

double helix structure

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17

prokaryotes

contain a singular circular chromosome (contain one circular loop of DNA)

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18

prokaryotes are able to transmit ___ to each other

plasmids

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19

Eukaryotic

linear chromosomes

DNA wraps around histone protein

nucleosomes make up chromatin fiber

coils tightly during mitosis

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20

helicase

an enzyme which unzips the DNA at the origins of replication by breaking hydrogen bonds between base pairs

uses ATP hydrolysis

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21

ATP hydrolysis

Breaks phosphate off of ATP to make ADP & release energy

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22

Topoisomerase

enzyme that prevents strands from recoiling

prevents strands from getting tangled

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23

DNA polymerase

requires RNA primers to initiate DNA synthesis (can only add in one direction

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24

leading strand

5’ strand adds nucleotides continuously toward the replication fork

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25

lagging strand

joins fragments on the lagging strand

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26

DNA ligase

joins the fragments on the lagging strand

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27

Prokaryotic DNA replication

same basic process but there is a single origin of replication that proceeds in both directions

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28

Does DNA replication occur quickly

YES

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29

semi-conservative

each new DNA consists of one strand from the original DNA and one new strand

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30

result of DNA replication

produces two identical copies of the DNA strand

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31

Central Dogma of biology

DNA encodes RNA, RNA encodes proteins

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32

Transcription

copying or transcribing of the information in the DNA onto an mRNA

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33

RNA processing

changes made to the transcribed RNA somewhat before it leaves the nucleus

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34

Translation

how the mRNA is translated at the ribosomes to produce chains of amino acids that will be folded into proteins

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35

mRNA

messenger RNA

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36

what does mRNA do?

carries genetic info from the nucleus to the ribosomes

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37

tRNA

transfer RNA

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38

what does tRNA do?

aids in bringing the correct amino acid to the ribosome to build the proteins

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39

rRNA

ribosomal RNA

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40

what does rRNA do?

a structural component of ribosomes that is produced in the nucleolus; structural component

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41

Step 1 Transcription

cell signal must first start to unwind the DNA in the nucleus at the gene that needs transcribed

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42

Step 2 Transcription

one strand of DNA will be the template and RNA bases will bind to it

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43

Choice of template strand

differs for each gene

can start with leading or lagging strand (only one will be used)

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Step 3 Transcription

RNA polymerase unzips and rezips the DNA

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45

Step 4 Transcription

promoter tells the RNA where it should start from (called the TATA box)

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46

Addition of RNA bases proceeds in the __’ to __’ direction

5’ to 3’ direction

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47

Elongation

occurs a the RNA bases are added

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48

Step 5 Transcription

DNA sequence on the gene signals the termination of transcription adds the poly-A tail

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49

RNA Processing Step 1

5’ capping

helps protect mRNA from degradation

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50

RNA Processing Step 2

addition of poly-A tail at 3’ end signals it is ready to leave nucleus and go to cytoplasm

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51

Introns

(noncoding parts of the gene) are cut out, in the trash

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52

Exons

(expressed parts of the gene) spliced back together & mRNA leaves nucleus

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53

Translation mRNA

codes every three bases for one amino acid

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54

Translation ribosomes

are where it all happen

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55

Translation tRNA

bring the correct amino acids to the template

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56

Translation every 3 nitrogen bases code for

a specific amino acid

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57

codon

every 3 nitrogen bases

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58

start codon for every protein

AUG

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59

Initiation

mRNA is transported to cytoplasm

attaches to a ribosome

start codon is read first

tRNA brings anti-codons

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60

Elongation

ribosome moves along the mRNA strand

read the codons of mRNA in order

tRNA brings anti-codons and donates amino acid

repeats for each codon

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61

Termination

when the stop codon is reached translation stops

mRNA leaves the ribosome

polypeptide chain folds into 3-dimensional shape

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