AP Bio Semester 1 Review Final Exam

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Matter

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660 Terms

1

Matter

Anything that takes up space and has mass.

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Element

Substance that cannot be broken down to other substances through chemical reactions. Each has a symbol. 92 occurring in nature.

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Compound

Substance consisting of two or more different elements combined in a fixed ratio. *Characteristics different than those of its elements

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4

CHON

4 elements essential to life

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Trace Elements

Required by an organism only in minute quantities.

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6

Atom

Smallest unit of matter that retains the properties of an element. Composed of subatomic particles. Mostly empty space.

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Subatomic particles

Neutrons, protons, electrons. Make up atoms.

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Proton

One unit of positive charge. Approximately one dalton. Located in nucleus.

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Electron

One unit of negative charge. Located outside of nucleus.

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Atomic Nucleus

Dense core packed with protons and neutrons.

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Neutrons

Electrically neutral. Approximately one dalton.

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Atomic Number

The number of protons (which is unique to that element) and written as a subscript to left of element symbol. Also tells us number of electrons since P=E if atom is neutral

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Mass Number

Sum of the protons and the neutrons. An approximation of the atomic mass.

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14

Isotopes

Same number of protons, but different number of neutrons and therefore different mass. Same element.

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Radioactive Isotope

One in which the nucleus decays spontaneously, giving off particles and energy. Can decay to a different element. Have useful applications.

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16

Energy

Capacity to cause change

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17

Potential Energy

Energy matter possesses because of its location or structure. Electrons have this based on distance from nucleus.

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18

Electron Shells

Where electrons are found, each with characteristic average distance and energy level. Electrons can change these by absorbing or losing energy.

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19

Valence Electrons

Electrons in the outermost shell.

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Chemical Bonds

The attraction that holds atoms together during an interaction.

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21

Covalent Bond

Sharing of a pair of valence electrons by two atoms.

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22

Molecule

Two or more atoms held together by covalent bonds.

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23

Single Bond

One pair of shared electrons.

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24

Structural Formula

H--H. Notation which represents both atoms and bonding.

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25

Double Bond

Sharing two pairs of valence electrons.

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Valence

Bonding capacity. Equal to the number of unpaired electrons required to complete the outermost (valence) shell.

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Electronegativity

The attraction of a particular kind of atom for the electrons of a covalent bond.

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Nonpolar Covalent Bond

Covalent bond in which electrons are shared equally.

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Polar Covalent Bond

Where one atom is bonded to a more electronegative atom and the electrons of the bond are not shared equally.

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ionic bond

The attraction of cations and anions.

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31

Ion

A charged atom.

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Cation

A positively charged atom.

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Anion

A negatively charged atom.

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34

Ionic Compounds

Or Salts. Compounds formed by ionic bonds.

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35

Hydrogen Bond

When a hydrogen atom covalently bonded to an electronegative atom is also attracted to another electronegative atom.

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36

van der Waals Interactions

Ever changing regions of positive and negative charge that enable all atoms and molecules to stick to one another.

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37

Molecular Shape

Determines how biological molecules recognize and respond to one another.

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38

Reactants

The starting materials of a chemical reaction.

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39

Products

The resulting material of a chemical reaction.

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40

Chemical Equilibrium

The point at which the relative concentrations of the products and the reactants stop changing and offset one another exactly.

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41

Carbohydrates, proteins, lipids, and nucleic acids

Name the 4 types of macromolecules

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42

Metabolism

All the chemical conversions that occur within a cell Metabolism = anabolism + catabolism

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Catabolism

Conversion of complex organic molecules into smaller molecules by breaking chemical bonds

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Anabolism

Conversion of small organic molecules by forming chemical bonds between smaller molecules

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45

Hydrolysis

Pocess that is the reverse of dehydration synthesis. In __________, or water breakage, the bond between monomers is broken by the addition of a water molecule.

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Dehydration synthesis

Reaction in which two molecules are covalently bonded, with the loss of a water molecule

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47

Polymers

Long molecules consisting of many similar or identical building blocks linked by covalent bonds.

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48

Glycosidic linkage

In carbohydrates, monosaccharides are joined together in a covalent bond called __________ _______.

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49

Monosaccharides

Carbohydrates are made up of _______________.

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50

Monosaccharide

The monomer in a carbohydrate is a(n) ______________. EX: Glucose

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51

Disaccharide

Two monosaccharides covalently bonded form a ____________. EX: Sucrose

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Polysaccharide

Three or more monosaccharides linked together form a ______________.

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53

Glycosidic linkage

The bond in a carbohydrate is a(n) __________ _______.

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54

Chitin; cellulose

Two examples of structural carbohydrates are ______ and _________.

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Cellulose

Polymer of β glucose monomers that is found in plant cell walls

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Glycogen; starch

Stored carbohydrate in an animal is called ________; in a plant, it is ______.

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α glucose

Starch and glycogen are polymers of ________ molecules.

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58

Polymers

Lipids are the only large biological molecules that do not form __________.

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59

Lipids

Cushioning of organs, insulation, and energy storage are three functions of ___________.

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Glycerol; fatty acid chains

Triglyceride is composed of a ______ and three ____ _____ ______.

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Unsaturated fats

Fats with one or more double covalent bonds, which is less likely to solidify and more flexible.

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Phospholipid

Basic structural component of cell membranes, with a polar/hydrophilic head region and a nonpolar/hydrophobic tail region, giving membranes their selective permeability.

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Steroid

Lipid characterized by a carbon skeleton consisting of hydrogen-fused rings.

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HDL

Good cholesterol is called ___ ____________. HINT: Keep your ____ HIGH :-)

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65

LDL

The bad cholesterol, which can harden in arteries. HINT: Keep your ____ LOW :-)

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Ester linkage

In a triglyceride, the ---OH of glycerol loses a H and the ---COOH of the fatty acid chain loses a ---OH which joins to form water in a(n) _____ _______.

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67

Amino acid

The monomer in a protein is a(n) _____ ____.

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Amino; carboxyl; R

Amino acids are formed of a(n) _____ group with a(n) ________ group and a(n) _ group side chain.

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69

20

different amino acids which can assemble according to genetic code to make different proteins.

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Peptide

In a _______ bond, the ---COOH group in one amino acid loses an ---OH and the ---NH2 group in another amino acid loses a H.

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Polypeptide

The polymer in a protein is a(n) ___________.

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3D structure

The amino acid sequence ultimately determine the __ _________ of proteins.

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Structure

A protein's _________ determines its function.

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Primary

At the _______ level of protein structure, a linear sequence of amino acids is joined by peptide bonds to form a polypeptide.

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Secondary

At the _________ level of protein structure, hydrogen bonds form between the partial positive hydrogen atom of amine groups and the partial negative oxygen atom of carboxyl groups.

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β Pleated Sheet

__ ___________ ______________ are a secondary structure found in proteins.

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α Helix

___ ___________ are a secondary structure found in proteins.

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Tertiary

At the ________ level of protein structure, various chemical associations in precise regions of a polypeptide cause it to fold into a 3D shape that will determine its function.

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Quaternary

At the __________ level of protein structure, 2 to 4 completely formed polypeptides combine.

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80

Sickle cell anemia

In this disease, one amino acid at the primary level (valine) replaces glutamic acid and the result is a distorted shape at the subsequent levels.

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81

Hormonal

Insulin and glucagon are examples of _________ proteins.

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82

Receptor

________ proteins are embedded in all membranes and allow cells to interact with molecules and other cells.

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83

Contractile/Movement

___________ proteins, such as actin and myosin, are found in muscle cells.

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Transport

_____________ proteins move molecules into and out of cells.

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85

Defensive

_________ proteins, like antibodies, are produced in response to antigens and bind to them.

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86

Denaturation

Excessive heat can cause ____________, in which a protein unravels and loses its native shape.

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87

Chaperonins

Assist in the proper folding of the protein by keeping the polypeptide segregated from disruptive chemical conditions in the cytoplasmic and create a hydrophilic environment for folding polypeptides

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88

Nucleotides

Nucleic acids are composed of ___________.

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89

Polynucleotide

The polymer in a nucleic acid is a(n) ______________.

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90

Phosphodiester bonds

Nucleotides link together via ________ _____ to form nucleic acid.

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91

Ribose

The sugar in RNA is ______.

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92

deoxyribose

The sugar in DNA is ______.

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93

A, T, C, G

The nitrogenous bases in DNA are ____.

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A, U, C, G

The nitrogenous bases in RNA are ____.

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95

Hydrogen

Nitrogenous bases in DNA and RNA form complementary base pairs by forming ____________ bonds.

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96

sugars; phosphate groups

The backbone of DNA and RNA molecules is composed of alternating _____________ and ______________.

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97

organic chemistry

The study of carbon & hydrogen compounds (organic compounds).

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98

carbon

this atom has 4 electrons in valence shell and can form 4 covalent bonds with other atoms

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99

hydrocarbon

An organic molecule consisting only of carbon and hydrogen.

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isomer

One of several compounds with the same molecular formula but different structures and therefore different properties. The three types are structural, geometric, and enantiomers.

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