Trace elements
elements needed only in minute quantities
ex: Fe, I, Zn
Essential elements
elements needed to live a healthy life and reproduce (humans have 25)
What is the approximate mass of protons and neutrons
1 dalton/amu
Radioactive isotopes
an isotope where the nucleus decays spontaneously, releasing energy and particles
Half-life
the time it takes for half to the parent isotope to decay
Energy
the capacity to cause change
Potential energy
energy possessed because of location or structure
Inert elements
Elements with a full valence shell, so chemically unreactive
Orbital
the 3D space where an electron mostly resides
Covalent bond
sharing a pair of valence electrons
Compound
combination of two or more different elements
Molecule
two or more atoms
Nonpolar covalent bond
electrons pulled relatively equally; low electronegativity
Polar covalent bond
electrons not shared equally
Ionic bond
ions attracting each other
Hydrogen bond
noncovalent attraction between H and electronegative atoms
Chemical reaction
the breaking and making of chemical bonds, causing a change in composition of matter
Reactants
starting materials
Products
resulting materials
4 properties of water
cohesion, temperature regulation, floating on ice, universal solvent
Cohesion
attraction of molecules to molecules of the same kind
Surface tension
a measure of how difficult it is to stretch or break the surface of a liquid
Adhesion
the clinging of one substance to another
Kinetic energy
the energy of motion
Temperature
average kinetic energy of molecules in a body of matter
Thermal energy
total kinetic energy of a body of matter (depends on volume)
Heat
thermal energy transfer from one body to another
calorie
amount of heat to raise 1g of water by 1 C
1 calorie is how many Joules
4.184 J
Hydrophilic
affinity for water
Hydrophobic
can't form hydrogen bonds, so repels water
Organic compound
a compound with carbon
Isomer
compounds with same formula but different structure
structural isomers
isomers that differ in covalent arrangements of atoms
cis-trans isomers
atoms have different spatial arrangement caused by double bonds
cis isomer
same groups on same sidd
trans isomer
same isomers on opposite sides
enantiomers
mirror images of each other due to asymmetric carbon
hydroxl group
—OH
are polar
forms H bonds with water
helps dissolve compounds
carbonyl group
>C=O
carboyxl group
—COOH
acts as an acid
amino groups
—NH₂
acts as an base
sulfhydryl groups
—SH
can form cross-links if reacts with each other, stabilizing proteins
phosphate groups
—OPO₃²⁻
allows a molecule to react with water releasing water
methyl groups
—CH₃
affects the expression of genes when bonded to DNA
hydrophobic
Macromolecule
large carbohydrates, proteins, and nucleic acids made of polymers
Monomer
building block of polymer
Polymerization
process where cells make polymers
Condensation reaction
connects monomers
Dehydration reaction
forms bond between monomers by removing water
Hydrolysis
breaks down polymers by adding water
Carbohydrate
macromolecule made of polysaccharides
Monosaccharide
monomer of carbs
have CH₂O formula
have carbonyl group
short term fuel source
glycosidic linkage
joins monosaccharides by dehydration reaction
polysaccharides
polymers with hundreds to thousands of monosaccharides
ex:
starch to store glucose
cellulose in cell walls
Lipids
hydrophobic but not polymers
fats
glycerol and 3 fatty acids
main function is energy storage
fatty acid
have long carbon skeleton and carboxyl end
ester linkage
bonds hydroxyl and carboxyl
ex: fatty acid to glycerol
saturated fat
doesn't have double bonds, so more hydrogen
solid at room temp
unsaturated fat
has cis double bonds that causes kinks
compacts less, so liquid at room temp
trans fat
fat with trans double bonds
Phospholipid
glycerol, 2 fatty acids, phosphate group, and polar attachment
hydrophilic head and hydrophobic tail
Steroid
4 fused carbon rings with chemical groups attached
Protein
made from one or more polypeptides with unique shape
amino acid
monomer of protein
has amino group, carboxyl group, H, and side chain
peptide bond
formed by dehydration reaction between amino and carboxyl
polypeptide
polymer of protein
has N terminus and C terminus
Primary structure
linear chain of amino acids
shows alpha helices and beta sheets
secondary structure
amino acids can helix or pleat
caused by hydrogen bonds between polypeptide backbone
tertiary structure
3d shape from secondary structure
stabilized by side chain interactions
Hydrophobic interaction
hydrophobic amino acids cluster at protein core
polar and charged side chains bond to give protein its shape
quaternary structure
two or more polypeptides together
Denaturation
protein unravels and loses native shape
Nucleic acids
macromolecules made from nucleotides
DNA
has 2 antiparallel polynucleotide strands in double helix
nucleotide
made of pentose, nitrogenous base, and 1-3 phosphate groups
free end with phosphate to 5’ carbon is 5’
free end with hydroxyl to 3’ carbon is 3’
phosphodiester linkage
phosphate linked to two nucleotides
causes sugar phosphate backbone
nucleoside
nucleotide without phosphate