Module 2 (MOLBIO LAB)

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All organisms contains both DNA and RNA except for?

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1

All organisms contains both DNA and RNA except for?

viruses

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2

___________ are our genetic information.

Nucleic acids

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3

Central Dogma of Molecular Biology: DNA - DNA

replication

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4

Central Dogma of Molecular Biology: DNA - RNA

transcription

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5

Central Dogma of Molecular Biology: RNA - Proteins

Translation

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6

Information from ____ are not directly utilized.

DNA

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7

Transcripts must be made from DNA to produce the genetic information, these are?

RNA

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8

is double-stranded, forming a double helix.

DNA

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9

usually single-stranded

RNA

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10

The double helix, the twisted-ladder structure of deoxyribonucleic acid (DNA) was discovered by?

James Watson and Francis Crick

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11

____ are polymers of nucleotides.

Nucleic acids

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12

COMPONENTS OF NUCLEIC ACID

Sugar, Phosphate, Nitrogenous Bases/ Nucleobases

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13

What do you call the double stranded RNA virus?

Reoviridae

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14

What do you call the sugar in DNA?

Deoxyribose

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15

What do you call the sugar in RNA?

Ribose

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16

What do we call a stucture containing 5 carbons?

Pentose

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17

The phosphate group is attached to the pentose sugar (DNA/RNA) via the ___ by a _____.

5’ carbon, phosphodiester bond.

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18

A nitrogenous base is attached to the pentose sugar (DNA/RNA) via the 1’ carbon by a _____

Glycosidic bond

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19

What are the two main bases?

Purine and Pyrimidine

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20

9 Carbon atoms; Double ring

Purine

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21

What are the two substituted purines?

Adenine and Guanine

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22

6 carbon atoms; single ring

Pyrimidine

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23

What are the three substituted pyrimidines?

Cytosine, Thymine, Uracil

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24

Base Pairing: Adenine and? (DNA)

Thymine

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25

Base pairing: Adenine and? (RNA)

Uracil

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26

Base pairing: Guanine and?

Cytosine

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27

A nitrogenous base with a pentose sugar component.

Nucleoside

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28

Nucleoside is a combination of?

Nitrogenous base with a pentose sugar

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29

Nucleoside differs from nucleotide because it lacks?

Phosphate group

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30

A substance made up of DNA or RNA and proteins,

Chromatin

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31

Proteins that binds DNA in the nuclei of eukaryotic cell

Histones

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32

One of the two identical halves of a chromosome that has been replicated in preparation for cell division

Chromatid

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33

Bundles of tightly coiled DNA located within the nucleus of almost every cell in our body

Chromosome

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34

It links a pair of sister chromatids together during cell division

Centromere

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35

DNA strands are long hence they are condensed and wrapped around proteins called _______ to form ___________.

Histones, chromatin

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36

Chromatin are still long and further condensed to form ____________________

Chromosomes

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37

SOURCES OF DNA

Plasmid DNA,

Viral Nucleic Acids,

Genomic DNA from Blood and Biological Fluids,

Genomic DNA from Tissue and Cells,

Genomic DNA from Forensic Samples,

Genomic DNA from Plant and Fungi,

Genomic DNA from Food and Feed

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38

Purpose of Extraction: to release ____ from the cell

Nucleic Acid

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39

Released nucleic acid from the cell can be used for analysis such as?

Polymerase Chain Reaction (PCR)

Restriction Fragment Length Polymorphism

Southern Blot Sequencing

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40

Analysis blot: Southern

DNA

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41

Analysis blot: Northern

RNA

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42

Analysis Blot: Western

Protein

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43

What are the 3 methods for the isolation of DNA?

Organic Isolation Method

Inorganic Isolation Method

Solid-Phase Isolation Method

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44

What are the 2 methods for the isolation of RNA?

Organic Isolation Method

Solid-Phase Isolation Method

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45

In Organic Isolation Method of DNA, cells are lysed to form _____, which releases the nucleic acid in the cells.

Lysate

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46

In Organic Isolation Method of DNA, ___ and ____ are used for the lysis of cells.

NaOH and SDS

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47

SDS stands for?

Sodium Dodecyl Sulphate

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48

What are the contaminants in Organic Isolation Method of DNA?

CHON, CHO, Lipids and Cell debris

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49

Contaminants in Organic Isolation Method of DNA are removed by adding _____.

Phenol-Chloroform Mixture

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50

Phenol-Chloroform Mixture: Organic Compound or Inorganic Compound

Organic Compound

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51

In Organic Isolation Method of DNA, DNA in aqueous solution will float on top. Which will be placed on a new tube and precipitated using ___ or ____ then centrifuged.

ethanol, isopropanol

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52

In Inorganic Isolation Method, _______, _____ and ____ are used for the lysis of cells.

Tris, EDTA and SDS

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53

EDTA stands for?

Ethylenediaminetetraacetic acid

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54

What is the function of Tris or tris(hydroxymethyl) aminomethane in Inorganic Isolation Method of DNA?

Keep a stable pH

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55

Contaminants in Inorganic Isolation Method of DNA must be removed by ________

Sodium Acetate

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56

The supernatant containing the DNA is then mixed with ___ or ____to precipitate the DNA to be collected and resuspended in a smaller volume. (Inorganic Isolation Method)

ethanol and isopropanol

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57

In Solid Phase Isolation Method, DNA solution are placed in a _____ which is a solid matrix.

Spin Column

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58

In Organic Isolation Method of RNA, the RNA must be protected from intracellular and extracellular RNases using _____

Guanidinium Isothiocyanate

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59

What should be done to remove any contaminating DNA in an RNA solution?

Treatment of RNA solution with DNase

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60

In Solid-Phase Isolation Method of RNA, what is added to the spin column to destroy remaining DNA?

DNase

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