BIO 1408 - Unit II Vocabulary

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Oxidative Phosphorylation

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64 Terms

1

Oxidative Phosphorylation

the final stage of cellular respiration; the process by which ATP synthesis is coupled to the movement of electrons through the mitochondrial electron transport chain and the associated consumption of oxygen

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2

Metabolism

The chemical changes that take place within a cell or an organism

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3

Potential Energy

Energy stored in chemical bonds

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4

Kinetic Energy

The energy of particles moving at different speeds, such as thermal energy

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5

Energy

Ability to do work

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6

Law of Conservation of Energy

The universe has a constant amount of energy; energy does not get created, it gets reused/regenerated

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7

Law of Entropy

No process is 100% efficient; inputting 100% will not guarantee 100% output. Example: when we eat a lollipop, we only absorb some of the energy we get from it

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8

Cellular Respiration

Cellular respiration is the process by which biological fuels are oxidised in the presence of an inorganic electron acceptor such as oxygen to produce large amounts of energy

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9

Dehydration Synthesis

the creation of larger molecules/polymers from smaller monomers where a water molecule is released

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10

Hydrolysis

A chemical process of decomposition involving the splitting of a bond by the addition of water

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11

Exergonic Reaction

a reaction that releases free energy. Example: cellular respiration

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12

Endergonic Reaction

a reaction that requires energy to be driven. Example: photosynthesis

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13

Energy Coupling

reactions that are joined together and are used to push the second reaction with the release of free energy in one reaction

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14

ATP

the source of energy for use and storage at the cellular level

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15

ADP

an important organic compound in metabolism and is essential to the flow of energy in living cells

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16

Phosphorylation

a process in which a phosphate group is added to a molecule, such as a sugar or a protein

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17

Enzyme

proteins that act as biological catalysts by accelerating chemical reactions

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18

Activation Energy

the amount of energy required to reach the transition state

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19

Activation Site

part of the enzyme where the catalytic activity takes place and whose shape permits the binding only of a specific reactant molecule

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20

Cofactor

a non-protein, typically metal ions, that sits in the active site of an enzyme; happens before reactions. Examples: zinc, magnesium, iron

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21

Coenzyme

a non-protein that takes the product produced by a reaction and makes sure it’s dealt with properly (transporting it etc.); made up of organic molecules like vitamins; happens after a reaction

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22

Feedback Loop (Enzymes)

helps cells keep track of what they need, thus controlling reaction rates; everything in a cell would fall into chaos without them

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23

Negative Feedback / Feedback Inhibition

suppression of the activity of an enzyme, participating in a sequence of reactions by which a substance is synthesized, by a product of that sequence

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Competitive Inhibition

has a similar shape to a substrate, it sits in the active site of an enzyme to block more substrates from fitting in; actively competes with substrates, think of a parking lot

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Non-Competitive Inhibitor

binds elsewhere on the enzyme to cease production

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26

Positive Feedback

rarer than negative feedback; tells the enzyme to keep going and increase production at the same time. Example: child birth releasing oxytocin

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27

Cell Membrane

a biological membrane that separates and protects the interior of all cells from the outside environment

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28

Fluid Mosaic

used to describe the plasma membrane which is composed of phospholipids and protein embeds

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Glycoprotein

protein embeds with carbohydrate tails, serves as identification tags that are specifically recognized by membrane proteins

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30

Selectively Permeable Membranes

not everything can get through the plasma membrane of a cell; proteins are primarily in charge of what enters and exits a cell

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31

Phospholipid Bi-layer

a two-layered arrangement of phosphate and lipid molecules that form a cell membrane; phospholipids are made up of polar heads and nonpolar tails

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32

Passive Transport

a type of membrane transport that does not require energy to move substances across cell membranes; think of diffusion, osmosis, and facilitated diffusion; moves from higher concentration to a lower concentration

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Active Transport

the movement of molecules or ions across a cell membrane from a region of lower concentration to a region of higher concentration; think of protein pumps, endocytosis, and exocytosis. Example: stomata in plants

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Diffusion

movement of anything generally from a region of higher concentration to a region of lower concentration until evenly distributed; think of how food dye disperses when placed in water. Examples: CO2, O2, and water molecules

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Facilitated Diffusion

the diffusion of solutes through transport/helper proteins in the plasma membrane. Examples: glucose, ions, and large molecules

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Osmosis

he net movement of water across a semipermeable membrane

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Hydration Shell

sphere of water molecules around each dissolved Ion. Example: these form when salt is dropped in water

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38

Hypotonic Solution

any external solution that has a low solute concentration and high water concentration compared to body fluids. Example: plant cells will swell due to excess water

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Hypertonic Solution

any external solution that has a high solute concentration and low water concentration compared to body fluids. Example: plant cells shrivel due to lack of water

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40

Isotonic Solution

any external solution that has the same solute concentration and water concentration compared to body fluids

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41

Anabolic Reaction

reactions that use energy to build complex molecules from simpler organic compounds (e.g., proteins from amino acids, carbohydrates from sugars, fats from fatty acids and glycerol)

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42

Catabolic Reaction

reactions that break complex molecules down into simpler ones, releasing chemical energy

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43

Allosteric site

an extra site on an enzyme that allows for a noncompetitive inhibitor to bind

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44

Active Site

the uniquely shaped pocket on an enzyme that allows for a substrate or competitive inhibitor to bind

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45

Endocytosis

the cellular process in which substances are brought into the cell

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46

Exocytosis

a form of active transport and bulk transport in which a cell transports molecules out of the cell

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Phagocytosis

a form of endocytosis in which substances are wrapped around and pulled into a vacuole

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48

Receptor-Mediated Endocytosis

substances must bind to receptors in order to be received into a cell

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49

Pinocytosis

allows the intake of fluid

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50

Kinase

a type of enzyme that adds chemicals called phosphates to other molecules

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51

Dehydrongenase

enzyme that oxidizes a substrate by transferring hydrogen to an acceptor

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52

Pyruvate

product when 6 carbon glucose are split into two 3 carbon pieces; end product of Glysis, which is converted into acetyl coA that enters the Krebs cycle when there is sufficient oxygen available

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Acetyle CoA

a coenzyme whose main function is to deliver the acetyl group to the citric acid cycle (Krebs cycle) to be oxidized for energy production

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54

Sub-Level Phosphorolation

when a phosphoryl group is transferred from a substrate to ADP to form ATP coupled with the release of free energy; happens during the first and third stages of cellular respiration

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Electron Transport Chain

where NAD+ is sent when it oxidizes; an electrochemical gradient that leads to the creation of ATP in a complete system named oxidative phosphorylation

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56

Oxidation

a biological process that involves the loss of electrons

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Reduction

a biological process that involves the gain of electrons

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58

Fermentation

defined as the extraction of energy from carbohydrates in the absence of oxygen

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59

Alcohol Fermentation

Ethanol is produced by alcoholic fermentation of the glucose in corn or other plants

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60

Lactic Acid Fermentation

a metabolic process by which glucose or other six-carbon sugars are converted into cellular energy and the metabolite lactate, which is lactic acid in solution

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61

Chemiosmosis

the process of moving ions (e.g. protons) to the other side of a biological membrane

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62

Glycolysis

first step in cellular respiration; the metabolic pathway that converts glucose into pyruvate

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63

Preparatory Reactions

second step in cellular respiration; generates a molecule of Acetyl-CoA from the Coenzyme A which can enter the mitochondria

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64

Citric Acid Cycle

also known as KREBS; third step in cellular respiration process; a series of chemical reactions to release stored energy through the oxidation of acetyl-CoA derived from carbohydrates, fats, and proteins

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