Biology paper 1

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Describe the role of a ribosome in the production of a polypeptide. Do not include transcription in your answer.

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1

Describe the role of a ribosome in the production of a polypeptide. Do not include transcription in your answer.

  • mRNA binds to ribosome

  • Idea of two codons/binding sites

  • Allows tRNA with anticodon to bind

  • Catalyses formation of peptide bond between amino acids (held by tRNA)

  • moves along mRNA to the next codon

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2

In a eukaryotic cell, the base sequence of the mRNA might be different from the sequence of the pre-mRNA

  • introns in pre-mRNA

  • Removal of introns/ splicing to produce mRNA

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3

Describe the structure of glycogen

  • Polysaccharide of alpha glucose

  • Joined by glycosidic bonds

  • Branched structure

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4

Suggest and explain two ways The cell surface membranes of cells lining the uterus may be adapted to allow rapid transport of nutrients.

  • Membrane folded so increased/large surface area

  • Large number of protein channels for facilitated diffusion

  • Large number of protein carriers for active transport

  • Large number of protein channels/carriers for co-transport

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5

High absorption of salt from the diet can result in a higher than normal concentration of salt in the blood plasma entering capillaries. This can lead to a buildup of tissue fluid. Explain how.

  • higher assault results in lower water potential of tissue fluid

  • So less water returns to capillary by osmosis

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6

Describe how bacteria divide.

  • Binary fission

  • Replication of circular DNA

  • Division of cytoplasm to produce two daughter cells

  • Each single copy of circular DNA

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7
<p>Explain the shape of the curves at 50°C and 60°C</p>

Explain the shape of the curves at 50°C and 60°C

  • both the denatured by high-temperature

  • Nature faster at 60°C due to more kinetic energy

  • Breaks hydrogen/ionic bonds between amino acids

  • Change in shape of the Active site ( no longer complimentary) so fewer enzyme-substrate complexes formed

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8

Mammals have some cells that produce extracellular proteases. They also have cells with membrane bound dipeptidases.

Describe the action of these membrane bound dipeptidases and explain their importance

  • hydrolyse peptide bonds to release amino acids

  • Amino acids can cross cell membrane

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9

Describe how phagocytosis of virus leads to presentation of its antigens

  • Phagosome/vesicle fuses with lysosome

  • Virus destroyed by lysozymes

  • Peptides/antigen are displayed on the cell membrane

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10

Describe how presentation of a virus antigen leads to the secretion of an antibody against the virus antigen

1. Helper T cell/TH cell binds to the antigen (on the antigen-presenting cell/phagocyte);

2. This helper T/TH cell stimulates a specific B cell;

3. B cell clones

Or

B cell divides by mitosis;

4. (Forms) plasma cells that release antibodies;

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11

Collagen is a protein produced by cells in joints

Rheumatoid arthritis RA is an auto immune disease in which persons immune system attacks its own cells at joints.

Scientist have found a virus that produces protein very similar to human collagen

Suggest how the immune response to this viral protein can result in the development of RA

  • The antibody against virus antigen will bind to collagen

  • This result in the destruction of the human collagen/cells

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12

Explain three ways in which an insects tracheal system is adapted for effective gas exchange

  • tracheoles Half thin wall so short diffusing distance to cells

  • Highly branched so short diffusion distance to cells

  • Highly branched so large surface area for gas exchange

  • Tracheae provide Chiefs full of air so fast diffusion into insects tissues

  • Fluid in the end of tracheoles that moves out into tissues during exercise so faster diffusion through the air to the gas exchange surface

  • Body can be moved by muscles to move air so maintains diffusion gradient for oxygen/carbon dioxide

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13
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14

What is a homologous pair of chromosomes?

Two chromosomes that carry the same gene

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15

Give two ways in which the arrangement of prokaryotic DNA is different from arrangement of human DNA

Prokaryotic DNA is

  • circular

  • Not associated with histones

  • Only one molecule of DNA

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16

What is meant by ‘species richness’?

A measure of the number of different species in a community

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17

Formation of an enzyme substrate complex increases the rate of reaction

  • reduces activation energy

  • Due to bending bonds

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18

The genetic code is described as degenerate.

What is meant by this?

More than one codon codes for a single amino acid

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19

Describe the gross structure of the human gas exchange system and how we breathe in and out

  • trachea, bronchi, bronchioles, alveoli

  • ^ ( in order)

Breathing in

  • Diaphragm contracts and external intercostal muscles contract

  • Volume increase and pressure decrease in thoracic cavity

Breathing out

  • diaphragm relaxes and internal intercostal muscles contract

  • Volume decrease and pressure increase in thoracic cavity

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20

Compare and contrast the structure and properties of triglycerides and phospholipids

  • both contain ester bonds

  • Both contain glycerol

  • Fatty acids on both may be saturated or unsaturated

  • Both are insoluble in water

  • Both contain carbon, hydrogen and oxygen but phospholipids also contain Phosphorus

  • Triglycerides have 3 fatty acids and phospholipids have 2 fatty acids plus phosphate group

  • Triglycerides are hydrophobic and phospholipids have hydrophilic and hydrophobic region

  • Phospholipids form micelle/bilayer in water but triglycerides don’t

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21

Tissue fluid is formed from blood at the arteriole end of a capillary bed.

Explain how water from tissue fluid is returned to the circulatory system.

  • plasma protein remain

  • Created water potential gradient

  • water moves to blood by osmosis

  • Returns to blood by lymphatic system

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22

Explain how an arteriole can reduce blood flow into capillaries.

Muscle contracts

Constricts/narrows lumen

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23

Explain why it is more useful to calculate an index of diversity than to record species richness

  • Index of diversity also measures abundance of each species

  • So useful because maybe many of some species

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24

Describe how HIV is replicated.

  • Attachment proteins attached to receptors on helper T cell

  • RNA enters cell

  • Reverse transcriptase converts RNA to DNA

  • Viral proteins produced

  • Virus assembled and released from cell

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25

Describe how the human immunodeficiency virus is replicated once inside helper T cells.

  • RNA converted into DNA using reverse transcriptase

  • DNA inserted into cell’s DNA/ nucleus

  • DNA transcribed into mRNA

  • HIV mRNA Translated into new HIV proteins for assembly into viral particles

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26

Describe how a phagocyte destroys a pathogen present in the blood

  • engulfs

  • Forming vesicle/phagosome and fuses with lysosome

  • Enzymes/ lysozymes digest pathogen

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27

Describe how B lymphocytes would respond to a vaccine.

  • B cell binds to specific/ complementary antigen

  • B cell divides by mitosis

  • Plasma cells produce antibodies against the virus

  • B cells produce memory cells

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28

What is a monoclonal antibody?

Antibodies with the same tertiary structure

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29

Describe the role of antibodies in producing a positive result in an ELISA test.

  • first antibody (complementary in shape) binds to antigen

  • Second antibody with enzyme attached is added

  • Second antibody attaches to antigen

  • Substrate/solution added and colour changes

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30

Describe and explain the role of antibodies in stimulating phagocytosis

  • Bind to antigen

  • Cause agglutination

Or

  • attract phagocytes

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31

Describe the role of micelles in the absorption of fat into the cell lining the ileum.

1. Micelles include bile salts and fatty acids;

2. Make the fatty acids (more) soluble in water;

3. Bring/release/carry fatty acids to cell/lining (of the ileum);

4. Maintain higher) concentration of fatty acids to cell/lining (of the ileum);

5. Fatty acids (absorbed) by diffusion;

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32
<p>At Q on figure 3 there is a small increase in pressure and in rate of blood flow in the aorta.</p><p>Explain how this happens and its importance.</p>

At Q on figure 3 there is a small increase in pressure and in rate of blood flow in the aorta.

Explain how this happens and its importance.

  • elastic recoil of the aorta wall/tissue

  • Smooths the blood flow

Or

  • maintains the rate of blood flow

Or

  • maintains blood pressure

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33

Define ‘non coding base sequences’ and describe where the non-coding multiple repeats are positioned in the genome.

  • DNA that does not code for polypeptides

  • Positioned between genes

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34

Describe how a polypeptide is formed by translation of mRNA

1. (mRNA attaches) to ribosomes

OR

(mRNA attaches) to rough endoplasmic reticulum;

2. (tRNA) anticodons (bind to) complementary (mRNA) codons;

3. tRNA brings a specific amino acid;

4. Amino acids join by peptide bonds;

5. (Amino acids join together) with the use of ATP;

6. tRNA released (after amino acid joined to polypeptide);

7. The ribosome moves along the mRNA to form the polypeptide;

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35

Describe how mRNA is formed by transcription in eukaryotes

1. Hydrogen bonds (between DNA bases) break;

2. (Only) one DNA strand acts as a template;

3. (Free) RNA nucleotides align by complementary base pairing;

4. (In RNA) Uracil base pairs with adenine (on

DNA)

OR

(In RNA) Uracil is used in place of thymine;

5. RNA polymerase joins (adjacent RNA)

nucleotides;

6. (By) phosphodiester bonds (between adjacent nucleotides);

7. Pre-mRNA is spliced (to form mRNA)

OR

Introns are removed (to form mRNA);

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36

Define a gene mutation

  • Change in the base/ nucleotide sequence of chromosomes/DNA

  • Results in the formation of new allele

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37

Explain how the phylogenetic classification is a hierarchy.

  • Smaller groups within larger groups

  • With no overlaps

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38

There are many different species of field mouse in Europe. Using a phylogenetic classification, all of these species have names that start with Apodemus.

What information does this give about field mice?

  • same genus

  • Same evolutionary origin/ common ancestor

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39

Define active immunity

A form of immunity provided by the immune response of the body upon detection of a pathogen.

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40

Define passive immunity

A form of immunity provide by the introduction of antibodies to a disease into the body

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41

What is resolution?

The ability to distinguish two different points in a specimen

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42

Define adaption

A feature of an organism that increases its chance of survival in its environment.

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43

Define allele

a version of a gene

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44

What is artificial classification?

It is a type of classification that divides organisms into groups based on their analogous characteristics (leaf shape, number of legs)

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45

define biodiversity

The variety of genes, species and habitats within a particular area

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46

What is directional selection?

A type of selection that favours individuals that differ in one direction from the population mean

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47

Define genetic diversity

The number of different alleles in a population

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48

What is the genome?

The entire set of genes in a cell

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49

What is the locus?

The position of a gene on a chromosome

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50

What is a mutagenic agent?

An agent that increases the rate of gene mutations above normal levels.

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51

What is Phylogenic classification?

A type of classification that divides organisms into groups based on evolutionary relationships and homologous characteristics.

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52

What is taxon?

Each group within a phylogenetic classification system

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53

Define condensation reaction

  • joining two molecules

  • Creating a chemical bond

  • Removing water

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54

Define hydrolysis reaction

  • breaks a chemical bond

  • Between two molecules

  • Use of water

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55

what is starch’s structure related to function?

  • Amylopectin - unbranched, increases surface area for rapid hydrolysis

  • Amylose - unbranched helix, compact

  • Insoluble so doesn’t effect water potential

  • Large so cannot leave cell

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56

What’s cellulose structure related to function?

  • long straight chains, hydrogen bonds in between

  • Many hydrogen bonds, microfibrils to fibrils result in collective strength

  • Against hydrostatic pressure

  • Insoluble - doesn’t effect water potential of cell

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57

What’s glycogen’s structure related to function?

  • highly branched so large surface area for hydrolysis into glucose

  • Very important as animals have a high metabolic rate

  • Insoluble so doesn’t affect water potential of cell

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58

function of triglycerides related to structure

  • energy store (large ratio of energy storing C-H bonds)

  • Metabolic water source (large ratio of C-H bonds which can release water when oxidised)

  • Insoluble as hydrophobic (doesn’t effect water potential)

  • Relatively low mass

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59

Define primary structure

  • Sequence of amino acids in the polypeptide chain

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60

Define secondary structure

  • Sequence of amino acids causes parts of a protein molecule to bend

  • Alpha helix or beta pleated sheet

  • hydrogen bonds

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61

Define tertiary structure

  • further folding of the secondary structure

  • Unique 3D structure

  • Hydrogen bonds , ionic bonds and disulphide bridges

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62

Define quaternary structure

More than one polypeptide chain

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63

What is an enzyme?

  • tertiary structure protein

  • Lowers activation energy

  • of reactions it catalyses

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64

What is the induced fit model?

  • active site changed shape slightly to fit substrate

  • Puts strain on the bonds

  • Lowers activation energy

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65

Result of too high and too low temperature on enzymes

Too low

  • not enough kinetic energy for successful collisions

Too high

  • enzymes denature

  • Active site changes

  • Enzyme substrate complexes cannot form

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66

Result of too high or too low pH on enzymes

  • interfere with charges on amino acids/ ionic bonds in the active site

  • Bonds break holding tertiary structure in place

  • Active site changes

  • Enzyme denatured

  • Fewer enzyme substrate complexes form

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67

what is a competitive inhibitor?

  • same shape of substrate

  • Binds to active site

  • Prevents enzyme substrate complexes forming

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68

What will happen if you add more substrate when a competitive inhibitor is present?

if you add more substrate it will flood/out-compete the inhibitor, knocking them out of the active site.

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69

What is a non competitive inhibitor?

  • binds to allosteric site (another site other than active site)

  • Causes active site to change shape

  • No enzyme substrate complexes

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70

What will happen if you add more substrate when a non competitive inhibitor is present?

The substrate can no longer bind, regardless of how much substrate is added.

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71

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